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DistroWatch.com: BioBrew Linux Distribution

BioBrew Linux Distribution

Last Update: 2017-08-26 01:22 UTC


BioBrew Linux is an open source Linux distribution based on the NPACI Rocks cluster software and enhanced for bioinformaticists and life scientists. While it looks, feels, and operates like ordinary Red Hat Linux, BioBrew Linux includes popular cluster software e.g. MPICH, LAM-MPI, PVM, Modules, PVFS, Myrinet GM, Sun Grid Engine, gcc, Ganglia, and Globus, *and* popular bioinformatics software e.g. the NCBI toolkit, BLAST, mpiBLAST, HMMER, ClustalW, GROMACS, PHYLIP, WISE, FASTA, and EMBOSS. It runs on everything from notebook computers to large clusters.

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BioBrew Summary
Distribution The BioBrew Linux Distribution
Home Page http://bioinformatics.org/biobrew/
Mailing Lists http://bioinformatics.org/mail/?group_id=273
User Forums http://bioinformatics.org/forum/?group_id=273
Alternative User Forums LinuxQuestions.org
Documentation --
Screenshots --
Screencasts
Download Mirrors http://bioinformatics.org/biobrew/
Bug Tracker --
Related Websites  
Reviews  
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Recent Related News and Releases
  Releases, download links and checksums:
 • 2005-02-23: Distribution Release: BioBrew Linux 3.1
 • More BioBrew releases...

Table Notes and Explanations

(Please refer to the table below.)
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  • To compare the software in this project to the software available in other distributions, please see our Compare Packages page.
  • Notes: In case where multiple versions of a package are shipped with a distribution, only the default version appears in the table. For indication about the GNOME version, please check the "nautilus" and "gnome-shell" packages. The Apache web server is listed as "httpd" and the Linux kernel is listed as "linux". The KDE desktop is represented by the "kdelibs" and "plasma-desktop" packages and the Xfce desktop by the "xfdesktop" package.
  • Colour scheme: green text = latest stable version, red text = development or beta version. The function determining beta versions is not 100% reliable due to a wide variety of versioning schemes.

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Feature 3.1 1.0
Release Date 2005-02-23 2004-01-20
End Of Life    
Price (US$) Free Free
Image Size (MB) 0-0  
Free Download ISO ISO
Installation Graphical Graphical
Default Desktop GNOME GNOME
Package Management RPM RPM
Release Model Fixed Fixed
Office Suite OpenOffice KOffice
Processor Architecture i386 i386
Init Software SysV SysV
Journaled File Systems ext3 ext3
Multilingual    
Asian Language Support -- --
Full Package List 3.1 1.0
Package 3.1 1.0
abiword (3.0.2) -- 0.99.5
alsa-lib (1.1.5) -- --
ati-driver (16.40) -- --
bash (4.4.12) 2.05b 2.05a
bind (9.11.2) 9.2.2 9.2.1
chromium (62.0.3202.94) -- --
cups (2.2.6) 1.1.17 1.1.14
dhcp (4.3.6) 3.0pl2 3.0pl1
e2fsprogs (1.43.7) 1.32 1.27
firefox (57.0) -- --
freetype (2.8.1) 2.1.4 2.0.9
gcc (7.2.0) 3.2.3 2.96
gimp (2.8.22) 1.2.3 1.2.3
glibc (2.26) 2.3.2 2.2.5
gnome-shell (3.26.2)    
gnucash (2.6.18-1) -- 1.6.6
gnumeric (1.12.36) -- 1.0.5
grub (2.02) 0.93 0.91
gtk+ (3.22.26) 2.2.4 2.0.2
httpd (2.4.29) 2.0.46 --
inkscape (0.92.2) -- --
k3b (17.08.3) -- --
kmod (24)    
libgnome (2.32.1) 2.2.2 --
libreoffice (5.4.3) 1.0.2 --
linux (4.14) 2.4.21 2.4.18
Package 3.1 1.0
lxde-common (0.99.2) -- --
mariadb (10.2.10)    
mate-desktop (1.18.0)    
mesa (17.2.5)    
mysql (5.7.20) 3.23.58 3.23.54a
nautilus (3.26.2) 2.2.4 1.0.6
NVIDIA (387.22) -- --
openbox (3.6.1) -- --
openjdk (8u151) -- --
openssh (7.6p1) 3.7.1p1 3.1p1
openssl (1.1.0g) 0.9.7a 0.9.6b
perl (5.26.1) 5.8.0 5.6.1
php (7.1.11) 4.3.2 4.1.2
plasma-desktop (5.11.3)    
postfix (3.2.4) 2.0.11 1.1.7
postgresql (10.1) -- 7.2.3
Python (3.6.3) 2.2.3 1.5.2
qt (5.9.2) 3.1.2 3.0.5
samba (4.7.2) 3.0.0 2.2.7
systemd (235)    
thunderbird (52.4.0) -- --
vim (8.0) 6.2 6.1
vlc (2.2.6) -- --
xfdesktop (4.12.4) -- --
xorg-server (1.19.5) -- --


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